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Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities

  • Jessica Schneider
  • , Oliver Rupp
  • , Eva Trost
  • , Sebastian Jaenicke
  • , Volkmar Passoth
  • , A Goesmann
  • , Andreas Tauch
  • , Karina Brinkrolf

    Publikation: Bidrag till tidskrift › Artikel i vetenskaplig tidskrift › Peer review

    Sammanfattning

    The ascomycetous yeast Wickerhamomyces anomalus (formerly Pichia anomala and Hansenula anomala) exhibits antimicrobial activities and flavoring features that are responsible for its frequent association with food, beverage and feed products. However, limited information on the genetic background of this yeast and its multiple capabilities are currently available. Here, we present the draft genome sequence of the neotype strain W. anomalus DSM 6766. On the basis of pyrosequencing, a de novo assembly of this strain resulted in a draft genome sequence with a total size of 25.47 Mbp. An automatic annotation using RAPYD generated 11 512 protein-coding sequences. This annotation provided the basis to analyse metabolic capabilities, phylogenetic relationships, as well as biotechnologically important features and yielded novel candidate genes of W. anomalus DSM 6766 coding for proteins participating in antimicrobial activities.
    OriginalspråkEngelska
    Sidor (från-till)382-386
    Antal sidor5
    TidskriftFEMS Yeast Research
    Volym12
    Nummer3
    DOI
    StatusPublicerad - 2012

    Nyckelord

    • next-generation sequencing
    • killer protein
    • volatile compound

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