Complete genome sequence of the plant-associated Serratia plymuthica strain AS13

Saraswoti Neupane; Roger D Finlay; Kyrpides Nikos C.; Goodwin  Lynne; Alström Sadhna; Lucas Susan; Land  Miriam L.; Han James; Lapidus Alla; Cheng Jan-Fang; Bruce David; Pitluck  Sam; Peters Lin; Ovchinnikova Galina; Held Brittany; Han Cliff; Detter John C.; Tapia  Roxanne; Hauser Loren; Ivanova Natalia; Pagani Ioanna; Woyke Tanja; Klenk Hans-Peter; Högberg Nils; et al.

doi:10.4056/sigs.2966299

Complete genome sequence of the plant-associated Serratia plymuthica strain AS13

Saraswoti Neupane
, Roger D Finlay
, Kyrpides Nikos C.
, Goodwin Lynne
, Alström Sadhna
, Lucas Susan
, Land Miriam L.
, Han James
, Lapidus Alla
, Cheng Jan-Fang
, Bruce David
, Pitluck Sam
, Peters Lin
, Ovchinnikova Galina
, Held Brittany
, Han Cliff
, Detter John C.
, Tapia Roxanne
, Hauser Loren
, Ivanova Natalia

Pagani Ioanna, Woyke Tanja, Klenk Hans-Peter, Högberg Nils, et al.

Institutionen för skoglig mykologi och växtpatologi

Publikation: Bidrag till tidskrift › Artikel i vetenskaplig tidskrift › Peer review

Sammanfattning

Serratia plymuthica AS13 is a plant-associated Gammaproteobacteria, isolated from rapeseed roots. It is of special interest because of its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The complete genome of S. plymuthica AS13 consists of a 5,442,549 bp circular chromosome. The chromosome contains 4,951 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced as part of the project entitled "Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens" within the 2010 DOE-JGI Community Sequencing Program (CSP2010).

Originalspråk	Engelska
Sidor (från-till)	22-30
Antal sidor	9
Tidskrift	Standards in Genomic Sciences
Volym	7
Nummer	1
DOI	https://doi.org/10.4056/sigs.2966299
Status	Publicerad - 2012

Nyckelord

Gram-negative
non-sporulating
motile
plant-associated
chemoorganotrophic
Enterobacteriaceae

Åtkomst av dokument

10.4056/sigs.2966299

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Neupane, S., Finlay, R. D., Kyrpides Nikos C., Goodwin Lynne, Alström Sadhna, Lucas Susan, Land Miriam L., Han James, Lapidus Alla, Cheng Jan-Fang, Bruce David, Pitluck Sam, Peters Lin, Ovchinnikova Galina, Held Brittany, Han Cliff, Detter John C., Tapia Roxanne, Hauser Loren, ... et al. (2012). Complete genome sequence of the plant-associated Serratia plymuthica strain AS13. Standards in Genomic Sciences, 7(1), 22-30. https://doi.org/10.4056/sigs.2966299

@article{430f51a7eee644c2b51b8146b52a035d,

title = "Complete genome sequence of the plant-associated Serratia plymuthica strain AS13",

abstract = "Serratia plymuthica AS13 is a plant-associated Gammaproteobacteria, isolated from rapeseed roots. It is of special interest because of its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The complete genome of S. plymuthica AS13 consists of a 5,442,549 bp circular chromosome. The chromosome contains 4,951 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced as part of the project entitled {"}Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens{"} within the 2010 DOE-JGI Community Sequencing Program (CSP2010).",

keywords = "Gram-negative, non-sporulating, motile, plant-associated, chemoorganotrophic, Enterobacteriaceae, Gram-negative, non-sporulating, motile, plant-associated, chemoorganotrophic, Enterobacteriaceae",

author = "Saraswoti Neupane and Finlay, \{Roger D\} and \{Kyrpides Nikos C.\} and \{Goodwin Lynne\} and \{Alstr{\"o}m Sadhna\} and \{Lucas Susan\} and \{Land Miriam L.\} and \{Han James\} and \{Lapidus Alla\} and \{Cheng Jan-Fang\} and \{Bruce David\} and \{Pitluck Sam\} and \{Peters Lin\} and \{Ovchinnikova Galina\} and \{Held Brittany\} and \{Han Cliff\} and \{Detter John C.\} and \{Tapia Roxanne\} and \{Hauser Loren\} and \{Ivanova Natalia\} and \{Pagani Ioanna\} and \{Woyke Tanja\} and \{Klenk Hans-Peter\} and \{H{\"o}gberg Nils\} and Nils H{\"o}gberg and Sadhna Alstr{\"o}m and \{et al.\}",

year = "2012",

doi = "10.4056/sigs.2966299",

language = "English",

volume = "7",

pages = "22--30",

journal = "Standards in Genomic Sciences",

issn = "1944-3277",

publisher = "Genomic Standards Consortium",

number = "1",

}

Neupane, S, Finlay, RD, Kyrpides Nikos C., Goodwin Lynne, Alström Sadhna, Lucas Susan, Land Miriam L., Han James, Lapidus Alla, Cheng Jan-Fang, Bruce David, Pitluck Sam, Peters Lin, Ovchinnikova Galina, Held Brittany, Han Cliff, Detter John C., Tapia Roxanne, Hauser Loren, Ivanova Natalia, Pagani Ioanna, Woyke Tanja, Klenk Hans-Peter, Högberg Nils & et al. 2012, 'Complete genome sequence of the plant-associated Serratia plymuthica strain AS13', Standards in Genomic Sciences, vol. 7, nr. 1, s. 22-30. https://doi.org/10.4056/sigs.2966299

TY - JOUR

T1 - Complete genome sequence of the plant-associated Serratia plymuthica strain AS13

AU - Neupane, Saraswoti

AU - Finlay, Roger D

AU - Kyrpides Nikos C., null

AU - Goodwin Lynne, null

AU - Alström Sadhna, null

AU - Lucas Susan, null

AU - Land Miriam L., null

AU - Han James, null

AU - Lapidus Alla, null

AU - Cheng Jan-Fang, null

AU - Bruce David, null

AU - Pitluck Sam, null

AU - Peters Lin, null

AU - Ovchinnikova Galina, null

AU - Held Brittany, null

AU - Han Cliff, null

AU - Detter John C., null

AU - Tapia Roxanne, null

AU - Hauser Loren, null

AU - Ivanova Natalia, null

AU - Pagani Ioanna, null

AU - Woyke Tanja, null

AU - Klenk Hans-Peter, null

AU - Högberg Nils, null

AU - Högberg, Nils

AU - Alström, Sadhna

AU - et al.

PY - 2012

Y1 - 2012

N2 - Serratia plymuthica AS13 is a plant-associated Gammaproteobacteria, isolated from rapeseed roots. It is of special interest because of its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The complete genome of S. plymuthica AS13 consists of a 5,442,549 bp circular chromosome. The chromosome contains 4,951 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced as part of the project entitled "Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens" within the 2010 DOE-JGI Community Sequencing Program (CSP2010).

AB - Serratia plymuthica AS13 is a plant-associated Gammaproteobacteria, isolated from rapeseed roots. It is of special interest because of its ability to inhibit fungal pathogens of rapeseed and to promote plant growth. The complete genome of S. plymuthica AS13 consists of a 5,442,549 bp circular chromosome. The chromosome contains 4,951 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced as part of the project entitled "Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens" within the 2010 DOE-JGI Community Sequencing Program (CSP2010).

KW - Gram-negative

KW - non-sporulating

KW - motile

KW - plant-associated

KW - chemoorganotrophic

KW - Enterobacteriaceae

KW - Gram-negative

KW - non-sporulating

KW - motile

KW - plant-associated

KW - chemoorganotrophic

KW - Enterobacteriaceae

UR - https://res.slu.se/id/publ/39003

U2 - 10.4056/sigs.2966299

DO - 10.4056/sigs.2966299

M3 - Journal article

C2 - 23450001

SN - 1944-3277

VL - 7

SP - 22

EP - 30

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

IS - 1

ER -