TY - JOUR
T1 - A New Method to Compare Statistical Tree Growth Curves: The PL-GMANOVA Model and Its Application with Dendrochronological Data
AU - Ricker, Martin
AU - Pena Ramirez, Victor M.
AU - von Rosen, Dietrich
PY - 2014
Y1 - 2014
N2 - Growth curves are monotonically increasing functions that measure repeatedly the same subjects over time. The classical growth curve model in the statistical literature is the Generalized Multivariate Analysis of Variance (GMANOVA) model. In order to model the tree trunk radius (r) over time (t) of trees on different sites, GMANOVA is combined here with the adapted PL regression model Q=A.T+E, where for b not equal 0 : Q=Ei[-b.r] - Ei[-b.r] and for b=0 : Q=Ln[r/r(1)], A = initial relative growth to be estimated, T=t-t(1), and E is an error term for each tree and time point. Furthermore, Ei[-b.r] = integral (Exp[b.r]/r)dr, b = -1/TPR, with TPR being the turning point radius in a sigmoid curve, and r(1) at t(1) is an estimated calibrating time-radius point. Advantages of the approach are that growth rates can be compared among growth curves with different turning point radiuses and different starting points, hidden outliers are easily detectable, the method is statistically robust, and heteroscedasticity of the residuals among time points is allowed. The model was implemented with dendrochronological data of 235 Pinus montezumae trees on ten Mexican volcano sites to calculate comparison intervals for the estimated initial relative growth (A) over cap. One site (at the Popocatepetl volcano) stood out, with (A) over cap being 3.9 times the value of the site with the slowest-growing trees. Calculating variance components for the initial relative growth, 34% of the growth variation was found among sites, 31% among trees, and 35% over time. Without the Popocatepetl site, the numbers changed to 7%, 42%, and 51%. Further explanation of differences in growth would need to focus on factors that vary within sites and over time.
AB - Growth curves are monotonically increasing functions that measure repeatedly the same subjects over time. The classical growth curve model in the statistical literature is the Generalized Multivariate Analysis of Variance (GMANOVA) model. In order to model the tree trunk radius (r) over time (t) of trees on different sites, GMANOVA is combined here with the adapted PL regression model Q=A.T+E, where for b not equal 0 : Q=Ei[-b.r] - Ei[-b.r] and for b=0 : Q=Ln[r/r(1)], A = initial relative growth to be estimated, T=t-t(1), and E is an error term for each tree and time point. Furthermore, Ei[-b.r] = integral (Exp[b.r]/r)dr, b = -1/TPR, with TPR being the turning point radius in a sigmoid curve, and r(1) at t(1) is an estimated calibrating time-radius point. Advantages of the approach are that growth rates can be compared among growth curves with different turning point radiuses and different starting points, hidden outliers are easily detectable, the method is statistically robust, and heteroscedasticity of the residuals among time points is allowed. The model was implemented with dendrochronological data of 235 Pinus montezumae trees on ten Mexican volcano sites to calculate comparison intervals for the estimated initial relative growth (A) over cap. One site (at the Popocatepetl volcano) stood out, with (A) over cap being 3.9 times the value of the site with the slowest-growing trees. Calculating variance components for the initial relative growth, 34% of the growth variation was found among sites, 31% among trees, and 35% over time. Without the Popocatepetl site, the numbers changed to 7%, 42%, and 51%. Further explanation of differences in growth would need to focus on factors that vary within sites and over time.
KW - growth curves
KW - growth curves
UR - https://res.slu.se/id/publ/66179
U2 - 10.1371/journal.pone.0112396
DO - 10.1371/journal.pone.0112396
M3 - Journal article
C2 - 25402427
SN - 1932-6203
VL - 9
JO - PLOS ONE
JF - PLOS ONE
IS - 11
M1 - e112396
ER -