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A method for extracting plant roots from soil which facilitates rapid sample processing without compromising measurement accuracy

  • Daniel Metcalfe
  • , A.C.L. da Costa
  • , A.P. Braga
  • , J. de Athaydes Silva Junior
  • , L.E.O.C. Aragao
  • , M. Williams
  • , P. Meir
  • , P.H.L. Goncalves
  • , S.S. de Almeida
  • , Y. Malhi

Publication: Contribution to journalJournal articlepeer-review

Abstract

This study evaluates a novel method for extracting roots from soil samples and applies it to estimate standing crop root mass (+/- confidence intervals) in an eastern Amazon rainforest. Roots were manually extracted from soil cores over a period of 40 min, which was split into 10 min time intervals. The pattern of cumulative extraction over time was used to predict root extraction beyond 40 min. A maximum-likelihood approach was used to calculate confidence intervals. The temporal prediction method added 21-32% to initial estimates of standing crop root mass. According to predictions, complete manual root extraction from 18 samples would have taken c. 239 h, compared with 12 h using the prediction method. Uncertainties (percentage difference between mean, and 10th and 90th percentiles) introduced by the prediction method were small (12-15%), compared with uncertainties caused by spatial variation in root mass (72-191%, for nine samples per plot surveyed). This method provides a way of increasing the number of root samples processed per unit time, without compromising measurement accuracy.
Original languageEnglish
Pages (from-to)697-703
Number of pages7
JournalNew Phytologist
Volume174
Issue number3
DOIs
Publication statusPublished - 2007

Keywords

  • Amazon tropical rainforest
  • maximum-likelihood approach
  • methodological evaluation
  • root sampling method
  • standing crop root mass
  • temporal prediction method

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